Resource CodeSystem/FHIR Server from package hl7.fhir.uv.genomics-reporting#current (46 ms)

Resources that use this resource

ValueSet
knowledge-base-version-vs	Knowledge Base Version Codes

Resources that this resource uses

No resources found

Narrative

Note: links and images are rebased to the (stated) source

Source

{
  "resourceType" : "CodeSystem",
  "id" : "knowledge-base-cs",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: CodeSystem knowledge-base-cs</b></p><a name=\"knowledge-base-cs\"> </a><a name=\"hcknowledge-base-cs\"> </a><a name=\"knowledge-base-cs-en-US\"> </a><p>This case-insensitive code system <code>http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/knowledge-base-cs</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">gnomadv4.1exome<a name=\"knowledge-base-cs-gnomadv4.461exome\"> </a></td><td>gnomad v4.1 exome</td><td>gnomAD version 4.1 exome</td></tr><tr><td style=\"white-space:nowrap\">gnomadv4.1genome<a name=\"knowledge-base-cs-gnomadv4.461genome\"> </a></td><td>gnomad v4.1 genome</td><td>gnomAD version 4.1 genome</td></tr><tr><td style=\"white-space:nowrap\">clinvar-april2024<a name=\"knowledge-base-cs-clinvar-april2024\"> </a></td><td>clinvar april 2024</td><td>Clinvar April 2024 release</td></tr><tr><td style=\"white-space:nowrap\">clinvar-march2024<a name=\"knowledge-base-cs-clinvar-march2024\"> </a></td><td>clinvar march 2024</td><td>Clinvar March 2024 release</td></tr><tr><td style=\"white-space:nowrap\">1000genomesv4.1.0<a name=\"knowledge-base-cs-1000genomesv4.461.460\"> </a></td><td>1000genomes v4.1.0</td><td>1000genomes version 4.1.0</td></tr><tr><td style=\"white-space:nowrap\">civicv1.2.0<a name=\"knowledge-base-cs-civicv1.462.460\"> </a></td><td>civic v1.2.0</td><td>CIViC version 1.2.0</td></tr><tr><td style=\"white-space:nowrap\">graspv2.1.0<a name=\"knowledge-base-cs-graspv2.461.460\"> </a></td><td>grasp v2.1.0</td><td>GRASP version 2.1.0</td></tr><tr><td style=\"white-space:nowrap\">oncokbv1.5.2<a name=\"knowledge-base-cs-oncokbv1.465.462\"> </a></td><td>oncokb v1.5.2</td><td>OncoKB version 1.5.2</td></tr><tr><td style=\"white-space:nowrap\">pharmgkbv2.3.5<a name=\"knowledge-base-cs-pharmgkbv2.463.465\"> </a></td><td>pharmgkb v2.3.5</td><td>PharmGKB version 2.3.5</td></tr><tr><td style=\"white-space:nowrap\">phastconsv3.6.0<a name=\"knowledge-base-cs-phastconsv3.466.460\"> </a></td><td>phascons v.3.6.0</td><td>PhastCons version 3.6.0</td></tr></table></div>"
  },
  "extension" : [
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
      "valueCode" : "cg"
    }
  ],
  "url" : "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/knowledge-base-cs",
  "version" : "3.0.0",
  "name" : "KnowledgeBaseCS",
  "title" : "Knowledge Base Codes",
  "status" : "active",
  "experimental" : true,
  "date" : "2025-05-14T18:00:07+00:00",
  "publisher" : "HL7 International / Clinical Genomics",
  "contact" : [
    {
      "name" : "HL7 International / Clinical Genomics",
      "telecom" : [
        {
          "system" : "url",
          "value" : "http://www.hl7.org/Special/committees/clingenomics"
        },
        {
          "system" : "email",
          "value" : "cg@lists.HL7.org"
        }
      ]
    }
  ],
  "description" : "This example code systems provides examples on how to properly display the knowledge base version number. Version numbers should always be followed by the letter v and calendar dates are displayed Month Day Year. For clarity the month SHALL be written in full.",
  "jurisdiction" : [
    {
      "coding" : [
        {
          "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
          "code" : "001",
          "display" : "World"
        }
      ]
    }
  ],
  "caseSensitive" : false,
  "content" : "complete",
  "count" : 10,
  "concept" : [
    {
      "code" : "gnomadv4.1exome",
      "display" : "gnomad v4.1 exome",
      "definition" : "gnomAD version 4.1 exome"
    },
    {
      "code" : "gnomadv4.1genome",
      "display" : "gnomad v4.1 genome",
      "definition" : "gnomAD version 4.1 genome"
    },
    {
      "code" : "clinvar-april2024",
      "display" : "clinvar april 2024",
      "definition" : "Clinvar April 2024 release"
    },
    {
      "code" : "clinvar-march2024",
      "display" : "clinvar march 2024",
      "definition" : "Clinvar March 2024 release"
    },
    {
      "code" : "1000genomesv4.1.0",
      "display" : "1000genomes v4.1.0",
      "definition" : "1000genomes version 4.1.0"
    },
    {
      "code" : "civicv1.2.0",
      "display" : "civic v1.2.0",
      "definition" : "CIViC version 1.2.0"
    },
    {
      "code" : "graspv2.1.0",
      "display" : "grasp v2.1.0",
      "definition" : "GRASP version 2.1.0"
    },
    {
      "code" : "oncokbv1.5.2",
      "display" : "oncokb v1.5.2",
      "definition" : "OncoKB version 1.5.2"
    },
    {
      "code" : "pharmgkbv2.3.5",
      "display" : "pharmgkb v2.3.5",
      "definition" : "PharmGKB version 2.3.5"
    },
    {
      "code" : "phastconsv3.6.0",
      "display" : "phascons v.3.6.0",
      "definition" : "PhastCons version 3.6.0"
    }
  ]
}

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